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Image Search Results
Journal: The Journal of Biological Chemistry
Article Title: Affinity Map of Bromodomain Protein 4 (BRD4) Interactions with the Histone H4 Tail and the Small Molecule Inhibitor JQ1
doi: 10.1074/jbc.M113.523019
Figure Lengend Snippet: Binding of BRD4 BD1 and BD2 to acetylated peptides. A , TR-FRET quantification of BRD4 BD1 and BD2 (100 n m ) binding to acetylated peptides derived from H3, H4 or RelA (200 n m each). B , determination of BRD4 BD1 and BD2 affinities to H4 K5(ac)K8(ac)K12(ac)K16(ac) using a TR-FRET homogeneous competition assay. 200 n m biotinylated H4 peptide and 50 n m BRD4 BD1 or 500 n m BRD4 BD2 were titrated with unlabeled H4 peptide at the concentrations indicated. Delta F values were plotted against the concentrations of unlabeled peptide (competitor). The fitting of data to the four-parameter equation described under “Experimental Procedures” (line) served to calculate the K D values indicated in . C , SPR sensorgrams of the interaction between BRD4 BD1 (immobilized on a 1000 m polycarboxylate chip) and histone H4 K5(ac)K8(ac)K12(ac)K16(ac). D , SPR sensorgrams of the interaction between BRD4 BD2 (immobilized on a 1000M polycarboxylate chip) and histone H4 K5(ac)K8(ac)K12(ac)K16(ac). The insets in C and D show SPR equilibrium resonance values Req versus [BRD4 BD1] and Req versus [BRD4 BD2] plots from which the K D values indicated in the text were calculated. Red lines represent the fit of the data to the Langmuir 1:1 and single-site equilibrium binding equations. All data are the mean values of at least two experiments with multiple replicates each.
Article Snippet: For peptide binding assays, BRD4 BD1 and BD2 (50 μg/ml in 25 m m HEPES, pH 7) were immobilized on
Techniques: Binding Assay, Derivative Assay, Competitive Binding Assay